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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2771325_2771672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2771325 - 2771672

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

GCTTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTGCTTTTATT

Flanking Amino Acid:

LKNALGLQSSSCVPPAQPNP

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

71.6

33.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.76

0.8

81.4

34.9

Minor 5ss

32.8

-2

2.7

42.3

38.4

Minor BPS

58.6

0.35

1.7

74.98

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008396

2768044 - 2771968

3925