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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2772141_2772879_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2772141 - 2772879

Intron Length:

739

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCCTGATTA

5'SS Class:

major

3'SS Sequence:

AGGTGCACAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CTGGTCTCACAG

Flanking Amino Acid:

SQYLHLCSLKIISFGSCQER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

61.3

40.1

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

46.8

-0.1

1.1

40.5

37.8

Minor 5ss

32.7

-2

47.4

48.1

Minor BPS

39.8

-0.9

1.9

39.58

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008560

2772102 - 2774961

2860