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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2781228_2781937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2781228 - 2781937

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGCATC

5'SS Class:

major

3'SS Sequence:

TTCTTTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TTTTCTTTTTCT

Flanking Amino Acid:

VETLTEMLQSYISEIGRSAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.1

65.6

40.2

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

0.76

0.7

77.2

31.6

Minor 5ss

41.4

-1

3.1

42.6

Minor BPS

48.1

-0

3.6

87.77

37.8

Associated Gene:

Gene:

TAF8

Ensembl Gene ID:

ENSAPLG00000008259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008593

2778398 - 2783725

5328