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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2816677_2817449_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2816677 - 2817449

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGCCAGCC

5'SS Class:

weak_major

3'SS Sequence:

GAGCTATCCTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGCTAT

U12 Branch Point Sequence:

CTGCTCGGAGCT

Flanking Amino Acid:

QPARPRGGQLGPSPVKSREL

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.3

0.08

1.2

45.4

37.2

Major BPS

43.3

-0.4

1.4

36.2

42.7

Major PPT

0.05

1.1

53.5

40.6

Minor 5ss

31.2

-2.1

3.5

42.6

44.6

Minor BPS

40.6

-0.6

2.2

57.52

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008756

2811266 - 2817670

6405