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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2817078_2817508_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2817078 - 2817508

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGT|GCAGGGCCT

5'SS Class:

weak_major

3'SS Sequence:

CCCTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

CTCTTCCCATTC

Flanking Amino Acid:

SQRELQETPRDCLKACQEQI

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.4

60.4

38.1

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

74.1

0.54

0.7

68.4

25.2

Minor 5ss

23.7

-3

4.3

39.7

45.8

Minor BPS

41.6

-0.6

50.19

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030833

2811266 - 2817670

6405