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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2835536_2842968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2835536 - 2842968

Intron Length:

7433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

ATCACAAGAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

72.5

0.56

1.1

63.4

Major PPT

82.2

0.72

0.7

74.9

35.5

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

43.1

-0.5

1.9

54.02

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009354

2835452 - 2851011

15560