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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2843114_2843928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2843114 - 2843928

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTGCCTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAAGAT

U12 Branch Point Sequence:

GGGTCTAAGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

77.2

32.9

Major BPS

55.1

0.13

1.2

52.7

41.6

Major PPT

69.7

0.44

67.8

Minor 5ss

34.1

-1.8

2.9

47.9

41.8

Minor BPS

43.6

-0.4

1.8

56.78

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018838

2842009 - 2859795

17787

ENSAPLT00000009354

2835452 - 2851011

15560