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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2849093_2849833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2849093 - 2849833

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

GAGCCTTTGATT

Flanking Amino Acid:

QVLRLHLKRFRWSERNHREK

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

0.85

0.9

39.9

Major PPT

83.1

0.75

0.8

77.1

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

57.8

0.33

1.2

65.77

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021434

2843957 - 2853199

9243

ENSAPLT00000018838

2842009 - 2859795

17787

ENSAPLT00000009354

2835452 - 2851011

15560