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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2850040_2850820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2850040 - 2850820

Intron Length:

781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGATTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TCTTTCTCACTT

Flanking Amino Acid:

YTAYCYNTEGGFWVHCNDSK

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

72.4

39.2

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

73.9

0.54

0.9

39.9

Minor 5ss

29.8

-2.3

3.4

39.7

46.3

Minor BPS

55.7

0.26

1.8

75.15

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018838

2842009 - 2859795

17787

ENSAPLT00000009354

2835452 - 2851011

15560