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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2867919_2868012_F

Intron Information:

Intron Rank:

124395

Intron Class:

major

Intron Phase:

Intron Coordinates:

2867919 - 2868012

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGGGA

5'SS Class:

major

3'SS Sequence:

CCTCTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

CGTGCCTAAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

60.5

40.3

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

74.9

0.56

0.7

68.3

25.5

Minor 5ss

23.6

-3

3.3

43.5

Minor BPS

0.11

1.8

62.34

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040314

2865906 - 2871299

5394

ENSAPLT00000029437

2864731 - 2871299

6569

ENSAPLT00000019919

2866572 - 2871299

4728