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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2869198_2869351_F

Intron Information:

Intron Rank:

124400

Intron Class:

major

Intron Phase:

Intron Coordinates:

2869198 - 2869351

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGCT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

CGCACTTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.7

36.9

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

74.2

0.55

69.3

41.1

Minor 5ss

-2.1

3.6

48.4

47.3

Minor BPS

47.9

-0

1.6

59.51

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040314

2865906 - 2871299

5394

ENSAPLT00000029437

2864731 - 2871299

6569

ENSAPLT00000019919

2866572 - 2871299

4728