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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2869831_2870402_F

Intron Information:

Intron Rank:

124411

Intron Class:

major

Intron Phase:

Intron Coordinates:

2869831 - 2870402

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTGCG

5'SS Class:

major

3'SS Sequence:

TTCCCCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

AAGCACGCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

62.6

42.1

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

0.49

0.9

64.7

36.4

Minor 5ss

32.1

-2

3.3

38.1

Minor BPS

40.8

-0.7

2.2

49.18

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040314

2865906 - 2871299

5394

ENSAPLT00000029437

2864731 - 2871299

6569