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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2870511_2870754_F

Intron Information:

Intron Rank:

124412

Intron Class:

major

Intron Phase:

Intron Coordinates:

2870511 - 2870754

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGCC

U12 Branch Point Sequence:

TTTGCCTCTCCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

34.2

-0.9

4.2

63.1

44.5

Major PPT

79.5

0.66

0.7

73.1

25.1

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

39.2

-0.8

3.7

66.89

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040314

2865906 - 2871299

5394

ENSAPLT00000029437

2864731 - 2871299

6569