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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2942223_2944994_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2942223 - 2944994

Intron Length:

2772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

CCGATGTTAACG

Flanking Amino Acid:

ELAGAPEAVTCQPQVRAAPQ

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

78.8

0.65

0.7

69.6

31.2

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

45.6

-0.4

2.1

46.66

46.5

Associated Gene:

Gene:

MDFI

Ensembl Gene ID:

ENSAPLG00000028389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029546

2940777 - 2945556

4780