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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2979687_2979722_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2979687 - 2979722

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCG|GCGGGGCCG

5'SS Class:

major

3'SS Sequence:

GGTCCTGAGCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

GGGTCCTGAGCG

Flanking Amino Acid:

VWGLRVVRAPRPARGCCRPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

51.4

39.8

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

43.1

-0.3

1.7

43.8

Minor 5ss

14.4

-4.1

3.6

21.6

37.3

Minor BPS

49.5

-0.1

1.8

54.34

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026278

2976761 - 2979853

3093