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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3001429_3004630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3001429 - 3004630

Intron Length:

3202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACGG

5'SS Class:

major

3'SS Sequence:

CAGTTTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TATATATTTACA

Flanking Amino Acid:

VELLHFQQQQTHVKSVVSY*

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

57.3

47.4

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

76.2

0.59

0.9

39.8

Minor 5ss

-2.3

3.3

38.8

46.3

Minor BPS

49.5

-0

1.9

66.27

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036673

3001399 - 3004810

3412