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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3130436_3130778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3130436 - 3130778

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCAGAT

U12 Branch Point Sequence:

TGGGTCAGACAC

Flanking Amino Acid:

LKWISLNVFKELHKLELDSL

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.9

35.3

Major BPS

49.7

-0

1.1

46.3

37.5

Major PPT

83.1

0.74

0.9

77.3

Minor 5ss

31.1

-2.2

2.6

35.1

Minor BPS

36.4

-1

1.8

41.62

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019158

3129760 - 3135506

5747

ENSAPLT00000017830

3129775 - 3135506

5732