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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3131903_3132306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3131903 - 3132306

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTGCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGTTTCTAAAAC

Flanking Amino Acid:

IRHHRKLKRRGNRQAEDIYD

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.1

36.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

64.7

0.33

1.1

66.4

38.7

Minor 5ss

38.1

-1.3

3.1

49.4

46.8

Minor BPS

60.5

0.31

1.8

71.98

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019158

3129760 - 3135506

5747

ENSAPLT00000017830

3129775 - 3135506

5732