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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3132357_3132832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3132357 - 3132832

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATCAT

U12 Branch Point Sequence:

TTTCTTTTCACA

Flanking Amino Acid:

IYDKPEDTTQLESTERMETP

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

62.7

0.32

1.3

40.9

Major PPT

90.8

0.92

0.6

87.1

23.5

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

61.7

0.36

1.7

75.92

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019158

3129760 - 3135506

5747

ENSAPLT00000017830

3129775 - 3135506

5732