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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3138647_3139460_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3138647 - 3139460

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCCTGAGG

5'SS Class:

weak_major

3'SS Sequence:

ACCAAGGTACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTTGTACTACCA

Flanking Amino Acid:

QKVQVKVLTGRTFLKVEPSL

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.4

48.2

47.5

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

45.6

-0.2

1.1

34.1

Minor 5ss

26.1

-2.7

32.2

41.9

Minor BPS

44.7

-0.4

2.2

64.53

41.9

Associated Gene:

Gene:

TREM2

Ensembl Gene ID:

ENSAPLG00000008731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009082

3135795 - 3143125

7331