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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3143626_3144819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3143626 - 3144819

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAC

U12 Branch Point Sequence:

CTTTTTTTCAAG

Flanking Amino Acid:

LLKRIMLEVLGEKQELDASP

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

76.3

30.6

Major BPS

61.7

0.29

63.7

32.3

Major PPT

82.8

0.74

82.6

32.9

Minor 5ss

33.6

-1.9

2.8

31.7

42.6

Minor BPS

49.1

-0.2

1.9

59.29

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009180

3141521 - 3146557

5037