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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3145705_3145943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3145705 - 3145943

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTATTCGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TGGTTCTGCACT

Flanking Amino Acid:

ATSYIRRKRAGKEMDFGRHP

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

70.2

40.3

Major BPS

0.47

1.2

61.1

45.5

Major PPT

72.7

0.51

1.1

69.5

41.4

Minor 5ss

34.7

-1.7

3.5

50.1

46.5

Minor BPS

52.4

0.15

1.9

73.09

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009180

3141521 - 3146557

5037