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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3155921_3156068_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

3UTR

Intron Coordinates:

3155921 - 3156068

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTCTGCC

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

CCAGTTTCAACC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.4

58.5

42.1

Major BPS

0.57

1.2

77.7

37.1

Major PPT

86.7

0.82

0.6

85.4

21.9

Minor 5ss

-1

2.9

54.2

Minor BPS

-0.2

1.6

50.01

41.2

Associated Gene:

Gene:

DENND2D

Ensembl Gene ID:

ENSAPLG00000003672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003765

3154921 - 3165942

11022