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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3158759_3159241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3158759 - 3159241

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGAG

5'SS Class:

major

3'SS Sequence:

TGCTCTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

GCTTGCTCAACC

Flanking Amino Acid:

ERVLDQPMEEALIVDLCKGK

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

66.9

38.5

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

79.3

0.66

0.8

77.3

31.4

Minor 5ss

38.2

-1.3

3.1

48.8

47.4

Minor BPS

55.4

0.15

67.35

44.1

Associated Gene:

Gene:

DENND2D

Ensembl Gene ID:

ENSAPLG00000003672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003765

3154921 - 3165942

11022