Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_3185697_3186121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3185697 - 3186121

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGGC

5'SS Class:

major

3'SS Sequence:

TGCTGTCTACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

CCCTGCTTAAAT

Flanking Amino Acid:

LFCSVRGFPQPKIIWMKNQM

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.3

72.7

38.2

Major BPS

0.5

1.1

76.9

32.8

Major PPT

70.4

0.46

62.6

43.1

Minor 5ss

28.4

-2.5

35.8

40.9

Minor BPS

54.7

0.22

68.4

48.2

Associated Gene:

Gene:

MYBPH

Ensembl Gene ID:

ENSAPLG00000002403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002457

3177612 - 3186322

8711