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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3227949_3228167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3227949 - 3228167

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGCA

5'SS Class:

major

3'SS Sequence:

ATGTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTGATGTTATTT

Flanking Amino Acid:

VLQIPTQNTQARQVLEREFN

Intron Amino Acid Position:

1080

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

66.7

39.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

81.3

0.7

0.9

78.3

39.6

Minor 5ss

28.1

-2.5

3.6

38.3

46.9

Minor BPS

46.3

-0.2

2.2

67.57

Associated Gene:

Gene:

PPFIA4

Ensembl Gene ID:

ENSAPLG00000014630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035113

3225508 - 3251849

26342

ENSAPLT00000030815

3224762 - 3251186

26425

ENSAPLT00000015344

3224762 - 3251186

26425

ENSAPLT00000043286

3225508 - 3251849

26342