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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3228344_3229010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3228344 - 3229010

Intron Length:

667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCAGC

5'SS Class:

major

3'SS Sequence:

TGCTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAG

U12 Branch Point Sequence:

TGCCCTGGGACA

Flanking Amino Acid:

RREETQHEIKDVLVWTNDQV

Intron Amino Acid Position:

1021

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

67.1

44.6

Major BPS

49.8

-0

1.7

51.1

46.3

Major PPT

85.1

0.79

0.8

80.1

31.9

Minor 5ss

35.1

-1.7

2.8

43.4

Minor BPS

42.7

-0.5

2.1

53.01

39.2

Associated Gene:

Gene:

PPFIA4

Ensembl Gene ID:

ENSAPLG00000014630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035113

3225508 - 3251849

26342

ENSAPLT00000030815

3224762 - 3251186

26425

ENSAPLT00000015344

3224762 - 3251186

26425

ENSAPLT00000043286

3225508 - 3251849

26342