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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3229920_3231810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3229920 - 3231810

Intron Length:

1891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGCTG

5'SS Class:

major

3'SS Sequence:

TTCGCTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCTAG

U12 Branch Point Sequence:

TTCGCTTTCACA

Flanking Amino Acid:

MENMATSTKTTLAYGDMNHE

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

60.8

45.3

Major BPS

-0.4

1.6

40.4

41.7

Major PPT

80.6

0.69

0.8

75.3

33.2

Minor 5ss

29.4

-2.4

3.4

39.3

Minor BPS

0.25

1.9

70.26

42.8

Associated Gene:

Gene:

PPFIA4

Ensembl Gene ID:

ENSAPLG00000014630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035113

3225508 - 3251849

26342