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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3230660_3231810_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3230660 - 3231810

Intron Length:

1151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGCTG

5'SS Class:

major

3'SS Sequence:

GTGGCATGCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TTTCTGTTGACA

Flanking Amino Acid:

MENMATSTKTDTEEGSWAQT

Intron Amino Acid Position:

921

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

60.8

45.3

Major BPS

67.6

0.44

1.2

Major PPT

54.4

0.1

51.1

42.9

Minor 5ss

29.4

-2.4

3.4

39.3

Minor BPS

57.6

0.23

2.1

75.39

35.8

Associated Gene:

Gene:

PPFIA4

Ensembl Gene ID:

ENSAPLG00000014630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043286

3225508 - 3251849

26342

ENSAPLT00000030815

3224762 - 3251186

26425

ENSAPLT00000015344

3224762 - 3251186

26425