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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3238757_3239709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3238757 - 3239709

Intron Length:

953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCCTGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

TTGCCCTGAACA

Flanking Amino Acid:

KQIEEHQHDKRRLSDEIDKL

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

34.8

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

0.36

61.9

38.7

Minor 5ss

33.3

-1.9

3.2

44.6

43.4

Minor BPS

71.2

0.66

1.4

78.23

37.9

Associated Gene:

Gene:

PPFIA4

Ensembl Gene ID:

ENSAPLG00000014630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030815

3224762 - 3251186

26425

ENSAPLT00000043286

3225508 - 3251849

26342

ENSAPLT00000035113

3225508 - 3251849

26342