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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3239773_3240662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3239773 - 3240662

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCAGCT

5'SS Class:

major

3'SS Sequence:

GAATTTTTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTCTTTTGAATT

Flanking Amino Acid:

KERMAALEEKNTLLQELENT

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.2

65.2

39.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

63.2

0.3

1.1

63.2

41.7

Minor 5ss

44.7

-0.6

3.2

45.1

Minor BPS

66.2

0.59

1.4

79.72

Associated Gene:

Gene:

PPFIA4

Ensembl Gene ID:

ENSAPLG00000014630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043286

3225508 - 3251849

26342

ENSAPLT00000035113

3225508 - 3251849

26342

ENSAPLT00000030815

3224762 - 3251186

26425