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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3275553_3276873_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3275553 - 3276873

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCGTGC

5'SS Class:

weak_major

3'SS Sequence:

TTTGTCATTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTTTGTCATT

Flanking Amino Acid:

VCEQPRVVSPVKSLCGLEAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.2

57.4

42.6

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

0.65

0.9

71.1

39.6

Minor 5ss

48.7

-0.1

2.9

67.9

43.4

Minor BPS

46.1

-0.2

2.3

70.08

42.4

Associated Gene:

Gene:

TMEM183A

Ensembl Gene ID:

ENSAPLG00000014430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033611

3275474 - 3282481

7008

ENSAPLT00000015050

3275474 - 3286193

10720