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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3279292_3280408_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3279292 - 3280408

Intron Length:

1117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACTC

5'SS Class:

strong_major

3'SS Sequence:

GTTGGCTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CTTGGGTTATGT

Flanking Amino Acid:

TAAFWTRLYRRHYSLDAYLP

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

77.8

0.63

0.9

73.4

41.9

Minor 5ss

31.1

-2.2

3.2

41.7

Minor BPS

37.5

-0.8

2.7

58.49

50.5

Associated Gene:

Gene:

TMEM183A

Ensembl Gene ID:

ENSAPLG00000014430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033611

3275474 - 3282481

7008

ENSAPLT00000015050

3275474 - 3286193

10720