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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3292154_3292451_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3292154 - 3292451

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GGCTCCCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

CTGAGCTGACCT

Flanking Amino Acid:

GSWQEQEPLEVEFKDLPLDT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

59.9

0.25

1.3

70.1

Major PPT

65.2

0.34

54.9

40.5

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

43.8

-0.3

2.1

61.09

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015024

3287486 - 3294568

7083

ENSAPLT00000038348

3288393 - 3294568

6176

ENSAPLT00000038096

3292019 - 3295568

3550