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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3292600_3293423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3292600 - 3293423

Intron Length:

824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

TTTTGCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TTTTTTTTGCCT

Flanking Amino Acid:

LLAGSLPPRKKFLAVGLASV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

60.3

39.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

87.2

0.84

0.7

81.4

30.6

Minor 5ss

28.9

-2.4

3.1

36.6

Minor BPS

48.7

-0

3.5

85.97

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038348

3288393 - 3294568

6176

ENSAPLT00000038096

3292019 - 3295568

3550

ENSAPLT00000015024

3287486 - 3294568

7083