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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3305546_3321252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3305546 - 3321252

Intron Length:

15707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TCTTCCATACAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

33.4

Major BPS

0.6

1.2

75.9

36.3

Major PPT

82.1

0.72

0.8

77.1

30.6

Minor 5ss

-1.1

53.2

44.1

Minor BPS

49.1

-0.2

2.1

61.5

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014928

3305400 - 3348674

43275