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Intron Name: Anas_platyrhynchos_platyrhynchos_27_33135_33436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33135 - 33436

Intron Length:

302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCGAAT

U12 Branch Point Sequence:

CTGCAGCGAATC

Flanking Amino Acid:

HLSICFPDYDGPNTFEDAGN

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

48.2

-0.1

1.4

55.4

40.2

Major PPT

74.5

0.55

0.7

68.5

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

34.7

-1.1

2.2

42.25

38.3

Associated Gene:

Gene:

GNAT2

Ensembl Gene ID:

ENSAPLG00000028730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046765

32929 - 36765

3837

ENSAPLT00000004462

32929 - 37861

4933