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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3325409_3325925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3325409 - 3325925

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATTATCTTAATT

Flanking Amino Acid:

MTSHRAVKSYKKSSIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

77.8

0.63

0.8

69.5

36.8

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

0.92

1.1

86.8

32.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014928

3305400 - 3348674

43275