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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3328283_3328777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3328283 - 3328777

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACTAT

U12 Branch Point Sequence:

AAGCTCTTACTA

Flanking Amino Acid:

SEVTSEYILKINKLTADDTD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

79.3

34.3

Major BPS

62.1

0.3

1.4

61.1

Major PPT

81.4

0.71

0.9

86.5

24.9

Minor 5ss

36.2

-1.6

3.4

51.2

45.7

Minor BPS

49.5

-0

1.6

55.74

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019066

3327118 - 3339096

11979

ENSAPLT00000014928

3305400 - 3348674

43275