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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3328878_3329772_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3328878 - 3329772

Intron Length:

895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TCTAAACTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTCTTCTAAACT

Flanking Amino Acid:

TCSAGLRIIQVGFKRKAQHV

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

100

1.24

0.5

100

Major PPT

70.8

0.47

0.9

66.4

39.3

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

65.1

0.55

1.7

78.66

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019066

3327118 - 3339096

11979

ENSAPLT00000014928

3305400 - 3348674

43275