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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3329821_3330718_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3329821 - 3330718

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCATAATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

CCCCCCATAATA

Flanking Amino Acid:

AQHVPAQSADELKKKLQDLR

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

59.8

0.22

0.9

54.4

27.7

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

50.9

0.02

1.7

57.21

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019066

3327118 - 3339096

11979

ENSAPLT00000014928

3305400 - 3348674

43275