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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3331711_3332304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3331711 - 3332304

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

TACCATTTACCA

Flanking Amino Acid:

RRDAESEQGELIHSIKNMEH

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.9

32.9

Major BPS

66.4

0.41

37.6

Major PPT

92.4

0.95

0.6

88.1

21.7

Minor 5ss

35.9

-1.6

3.3

46.4

48.9

Minor BPS

48.3

-0.1

1.8

58.72

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019066

3327118 - 3339096

11979

ENSAPLT00000014928

3305400 - 3348674

43275