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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3333197_3333846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3333197 - 3333846

Intron Length:

650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCATTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTTTTTCCATT

Flanking Amino Acid:

PVFSTELDAESIPVRFQQPL

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

84.6

32.8

Major BPS

0.85

0.9

39.9

Major PPT

86.5

0.82

0.8

78.4

34.7

Minor 5ss

40.6

-1

3.4

62.3

42.4

Minor BPS

53.3

0.19

1.9

79.05

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019066

3327118 - 3339096

11979

ENSAPLT00000014928

3305400 - 3348674

43275