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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3334120_3335120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3334120 - 3335120

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

ATCTTCAATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTCTTCAATC

Flanking Amino Acid:

CSSNAYLLVEYPKGKKRQDE

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

68.8

36.5

Major BPS

78.2

0.7

79.9

32.6

Major PPT

73.1

0.52

66.7

37.9

Minor 5ss

-1.7

3.3

44.3

43.6

Minor BPS

0.73

1.4

82.42

31.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014928

3305400 - 3348674

43275

ENSAPLT00000019066

3327118 - 3339096

11979