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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3340004_3340534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3340004 - 3340534

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTATCTGCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATTTTTTAATG

Flanking Amino Acid:

IKTEASIFVEDPPQVDKVLL

Intron Amino Acid Position:

1708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.9

0.4

66.5

39.9

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

65.9

0.36

1.3

63.33

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014928

3305400 - 3348674

43275