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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3344643_3345558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3344643 - 3345558

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTATTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

TGGACTGTAACT

Flanking Amino Acid:

NTIRVDIPFEASPDPEVTWL

Intron Amino Acid Position:

2139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

62.2

0.3

1.2

38.7

Major PPT

0.7

0.8

75.8

32.5

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

53.5

0.19

2.1

73.14

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014928

3305400 - 3348674

43275