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Intron Name: Anas_platyrhynchos_platyrhynchos_27_33591_35231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33591 - 35231

Intron Length:

1641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGGTTTG

5'SS Class:

major

3'SS Sequence:

CGTTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTGTAACCAAGC

Flanking Amino Acid:

DMVLVEDDEVNRMHESLHLF

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

67.5

40.3

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

80.6

0.69

0.9

76.9

37.3

Minor 5ss

37.1

-1.5

3.2

44.5

Minor BPS

38.6

-0.8

2.3

53.83

43.3

Associated Gene:

Gene:

GNAT2

Ensembl Gene ID:

ENSAPLG00000028730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046765

32929 - 36765

3837

ENSAPLT00000004462

32929 - 37861

4933