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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3386435_3388170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3386435 - 3388170

Intron Length:

1736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAG

U12 Branch Point Sequence:

ATGTCAGCACGT

Flanking Amino Acid:

CFQDESAKQEVYRLGGIAKL

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

52.1

0.05

1.6

63.1

44.4

Major PPT

73.4

0.53

68.4

37.3

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

35.1

-1

2.5

55.36

46.4

Associated Gene:

Gene:

PKP1

Ensembl Gene ID:

ENSAPLG00000013591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014162

3362457 - 3400456

38000