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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3391429_3392205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3391429 - 3392205

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAGCT

5'SS Class:

major

3'SS Sequence:

GGGGTGATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAT

U12 Branch Point Sequence:

TGGGGGTGATTT

Flanking Amino Acid:

CVASNRPDDKSVENCICILH

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

63.6

41.2

Major BPS

64.2

0.35

1.3

65.8

39.5

Major PPT

61.3

0.25

1.1

48.7

Minor 5ss

37.5

-1.4

3.6

57.4

46.7

Minor BPS

34.1

-1.1

2.4

48.67

44.9

Associated Gene:

Gene:

PKP1

Ensembl Gene ID:

ENSAPLG00000013591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014162

3362457 - 3400456

38000