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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3392642_3394728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3392642 - 3394728

Intron Length:

2087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

TGAGACATCACT

Flanking Amino Acid:

LQNLTASRGLMSNAMSQLIG

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

76.5

0.6

0.8

69.4

36.9

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

43.6

-0.4

2.2

63.77

45.6

Associated Gene:

Gene:

PKP1

Ensembl Gene ID:

ENSAPLG00000013591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014162

3362457 - 3400456

38000